PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.LV58R
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 338aa    MW: 38150.6 Da    PI: 4.76
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.LV58RgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.92.4e-10153196755
                  HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  + ErrRR+r+++++  Lr+l+P+      +K++Ka+i   A  Y+++Lq
  Araip.LV58R 153 ISERRRRSRMKEKLYALRSLVPNI-----TKMDKASIIGDALSYVHELQ 196
                  78*********************7.....7*****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.51146195IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.57E-16148215IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000836.58E-13148198No hitNo description
Gene3DG3DSA:4.10.280.108.1E-17148211IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-14152201IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.5E-8152196IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0034756Biological Processregulation of iron ion transport
GO:0071281Biological Processcellular response to iron ion
GO:0071369Biological Processcellular response to ethylene stimulus
GO:0071732Biological Processcellular response to nitric oxide
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    Send to blast
MDAHQETLIF NNDYEVHDFT EDPNFDQLIN LIRGDNNNED DAAVFFNYGS DIIINDCFLD  60
DNQNQNDLLL PCPTTAHNPY DQIHQSHNNN SSNEVMMNNV CDTNLISSFS CFDEGVVNRE  120
NEGEYSSATT TATDEANLSG KPRVKADRSK TLISERRRRS RMKEKLYALR SLVPNITKMD  180
KASIIGDALS YVHELQAQAK KLKAEVAGLE ASLFVSENYK ASFDDNYIKT VQVTHNSHPI  240
NKKIVQIEMV QVEERGYYVK IVCNKGGGVA ASLYRALESL VGFSVRNSNF ETVCDTILLT  300
FTLNVKGFEP EVNLPNLKLW VTGALLNQGF EFMGNFHY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016169538.10.0PREDICTED: transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
SwissprotQ0V7X43e-99FIT_ARATH; Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR
TrEMBLC0JP281e-136C0JP28_LOTJA; Putative basic helix-loop-helix protein BHLH21
STRINGGLYMA12G30240.11e-125(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36793358
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.14e-89FER-like regulator of iron uptake